冠层光谱红边参数结合随机森林机器学习估算冬小麦叶绿素含量

    Estimation of winter wheat chlorophyll content by combing canopy spectrum red edge parameters with random forest machine learning

    • 摘要: 作物光谱红边参数与叶绿素含量密切相关,是作物生长发育和营养状况的指示器。基于红边参数构建叶绿素含量探测模型是大尺度监测作物长势的有效方法。为提升冬小麦叶绿素含量探测精度,构建适用于不同生育期和施氮水平条件的叶片叶绿素相对含量(chlorophyll content, CHL)估算模型。该研究通过4 a大田试验,获取冬小麦4个关键生育期(拔节期、抽穗期、开花期和灌浆期)和3种施氮水平条件下的冠层光谱反射率和叶片CHL。系统比较和评估了47种光谱红边参数对CHL的敏感性,同时采用逐步选择红边参数相对重要性提升了随机森林机器学习模型估算冬小麦CHL的精度。结果表明:光谱红边参数对CHL的敏感性受到冬小麦生育期和施氮水平的影响,在单一生育期中的最佳红边参数与CHL的决定系数R2在0.39和0.89之间。全生育期中最佳红边参数为NDDRmid,与CHL的决定系数R2为0.76。灌浆期敏感性最高,红边参数REPRpi、NDDRmid、RVI2、RVI4、RVI5、RVI6、NDRE、RVI12和RVI13与CHL的决定系数都高于0.80,红边参数RVI5与CHL的决定系数R2为0.89。单一施氮水平条件下敏感性最佳的红边参数与CHL的决定系数在0.75和0.81之间。在N1和N2条件下,最佳红边参数为NDDRmid。在N3条件下RIDRfd与CHL的决定系数最高,R2为0.81。在所评估的光谱红边参数中,NDDRmid、RVI5、RVI12和DIDA在单一生育期和施氮水平条件下都表现出较高的相关性。逐步选择相对重要性红边参数特征优化随机森林模型提升了CHL的估算精度,全生育期中最佳估算精度为R2=0.80和RMSE=4.25。不同生育期和施氮水平条件下,红边参数DIDA和RVI13都作为随机森林模型的重要特征。研究结果揭示了光谱红边参数在不同生育期和施氮条件下估算冬小麦CHL的潜力,同时也为基于红边参数特征的其他类型农作物叶绿素含量探测研究提供了参考。

       

      Abstract: The sudden increase in vegetation canopy reflectance from low reflectance in red band to near infrared band forms the red-edge spectral characteristics, which is unique to healthy vegetation. Many parameters that can describe this characteristic have been designed and developed as important indicators of crop growth and nutrition status. However, few studies have systematically compared and evaluated the applicability of these red-edge parameters to estimate winter wheat leaf CHL values at different growth stages and nitrogen application levels. In this study, canopy spectral reflectance and leaf CHL of winter wheat at 4 key growth stages (jointing stage, heading stage, flowering stage and filling stage) and 3 nitrogen application levels were obtained through a 4-year field experiment. The sensitivity of 47 spectral red-edge parameters to CHL was evaluated, and the relative importance of spectral red-edge parameters was used to optimize the random forest machine learning model to estimate winter wheat CHL. The results showed that the sensitivity of spectral red edge parameter to CHL was affected by the growth period and nitrogen application level of winter wheat, and the correlation R2 between the best red edge parameter and CHL in a single growth period was between 0.39 and 0.89. The best red-edge parameter in the whole growth period was NDDRmid, and the coefficient of determination between it and CHL was 0.76. The sensitivity was the highest in filling stage, and the coefficient of determination between the best red edge parameter RVI5 and CHL was 0.89 and the R2 between red edge parameters REPRpi, NDDRmid, RVI2, RVI4, RVI5, RVI6, NDRE, RVI12 and RVI13 with CHL were all higher than 0.80. Nitrogen application level increased the sensitivity of red-edge parameter to CHL. At single nitrogen application level, the coefficient of determination between best red edge parameter and CHL was between 0.75 and 0.81. At N1 and N2 conditions the best red-edge parameter is NDDRmid, and at N3 condition the best red-edge parameter is RIDRfd (R2=0.81). The sensitivity of the red edge parameters NDDRmid, RVI5, RVI12 and DIDA to CHL at different growth stages and nitrogen application levels were all in the best 10 red-edge parameters. In the four single growth stages, the best accuracy of the random forest model was achieved, when 10 to 30 relative importance red-edge parameters were used as inputs, with R2 between 0.40 and 0.89 and RMSE between 3.07 and 5.29. At four individual growth stage, the best accuracy of the model was achieved at jointing stage when 10 red edge parameters were used. At the three nitrogen application levels, the model performed best when 10 to 30 relatively important red-edge parameters were used, with R2 between 0.78 and 0.87 and RMSE between 2.79 and 4.47. With the increase of nitrogen application level, the model accuracy was enhanced. At N3 condition, the model performed best when 30 relatively important red edge parameters were used with R2 = 0.87 and RMSE=2.79. Step by step selection of relative importance red edge parameter features as input to optimize the random forest machine learning model improved the estimation accuracy of CHL. The best estimation accuracy in the whole growth period was R2 =0.80 and RMSE=4.25. With the increase of nitrogen application level, the estimation accuracy of the model was improved, R2 =0.87 and RMSE=2.79 at the condition of N3. At different growth stages and nitrogen application levels, the red-edge parameters DIDA and RVI13 were used as important features to construct the best model. The results revealed the potential of spectral red edge parameter in estimating CHL of winter wheat under different growth stages and nitrogen application conditions, and also provided a reference for the detection of chlorophyll content of other crops based on the characteristics of red edge parameter.

       

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